PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5AL_04D3E97F0.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 299aa    MW: 31859.4 Da    PI: 5.7842
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5AL_04D3E97F0.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.27.3e-13111162556
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                            +  rrkq+NRe+ArrsR RK a + eLe  v +L  eN++L  +l   ++++
  Traes_5AL_04D3E97F0.1 111 RLRRRKQSNRESARRSRSRKAAHLNELEAQVSQLRVENSSLLRRLADVNQKY 162
                            5679*************************************99998877766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.0E-18107171IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-10109162No hitNo description
PROSITE profilePS5021711.438109163IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-9111162No hitNo description
PfamPF001702.1E-10111161IPR004827Basic-leucine zipper domain
PfamPF124983.8E-45178292IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MLKQKLEKDL AAVAMWRASG AMPPERFAAN PSLPNADVQH IGTINPIGGN VVPVQNKLAG  60
GASGVLGPQL VQNADALVKQ AASSSSREQS EDDDMEGEDE ITGNGAPTDQ RLRRRKQSNR  120
ESARRSRSRK AAHLNELEAQ VSQLRVENSS LLRRLADVNQ KYNGAAVDNR VLKADVETLR  180
AKVKMAEDSV KRVTGMSALF PAGSDMSSLS MPFTGSPSEA TSDAAVPDDL SAYFSTSEAG  240
GNNGYMPEMA SSAQEDDNFL NEAMDTGKMG RPDSLHRVAS LEHLQKRMCG GPASSGSTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3606030.0AK360603.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv1121N05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003557420.11e-164PREDICTED: light-inducible protein CPRF2-like
TrEMBLW5EUA40.0W5EUA4_WHEAT; Uncharacterized protein
STRINGBRADI1G05480.11e-164(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.15e-34bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]